Gene: Solyc12g088210.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g088210.3
- Transcript Identifier Solyc12g088210.3.1
- Gene Type Coding gene
- Location SL4.0ch12 : 63218315-63223603 : positive
Gene Family Information
- ID HOM05D000676
- #Genes/#Species 848/97
- Phylogenetic origin
- ID ORTHO05D003334
- #Genes/#Species 230/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc12g088210.3.1
- uniprot A0A3Q7JXS0
- gene_id Solyc12g088210
Descriptions
- Description Endo-1,4-beta-xylanase 1 (AHRD V3.3 *** XYN1_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
GO:0016798 | IEA | InterPro | hydrolase activity, acting on glycosyl bonds | |
GO:0016787 | IEA | GOA Database | hydrolase activity | |
GO:0031176 | ISO | PLAZA Integrative Orthology | endo-1,4-beta-xylanase activity | AT1G58370 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT1G58370 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
21.2.2.2.4 | Cell wall organisation.hemicellulose.xylan.modification and degradation.endo-beta-1,4-xylanase |