Gene: AT1G58370

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G58370
  • Transcript Identifier AT1G58370.2
  • Gene Type Coding gene
  • Location Chr1 : 21684537-21688209 : positive

Gene Family Information

  • ID HOM05D000676
  • #Genes/#Species 848/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G58370.2
  • symbol RXF12
  • uniprot G1JSH1

Descriptions

  • Description glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein
  • Computational description RXF12; FUNCTIONS IN: endo-1,4-beta-xylanase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein (TAIR:AT1G10050.1); Has 2572 Blast hits to 2336 proteins in 449 species: Archae - 10; Bacteria - 1384; Metazoa - 31; Fungi - 355; Plants - 353; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045493
IEA
Gene Ontologyxylan catabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031176
IDA
Gene Ontologyendo-1,4-beta-xylanase activity1
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016798
IEA
InterProhydrolase activity, acting on glycosyl bonds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005618
IDA
Gene Ontologycell wall1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003305 Carbohydrate-binding, CenC-like
IPR044846 Glycoside hydrolase family 10
IPR017853 Glycoside hydrolase superfamily
IPR008979 Galactose-binding-like domain superfamily
IPR001000 Glycoside hydrolase family 10 domain
Mapman id Description
21.2.2.2.4 Cell wall organisation.hemicellulose.xylan.modification and degradation.endo-beta-1,4-xylanase