Gene: Solyc12g042790.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g042790.1
  • Transcript Identifier Solyc12g042790.1.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 57842738-57843466 : negative

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g042790.1.1
  • uniprot A0A3Q7J9M0
  • gene_id Solyc12g042790

Descriptions

  • Description RBR-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G3C422_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0032436
IBA
GOA Databasepositive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209
IBA
GOA Databaseprotein polyubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity
GO:0031624
IBA
GOA Databaseubiquitin conjugating enzyme binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
IBA
GOA Databaseubiquitin ligase complex
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031127 E3 ubiquitin ligase RBR family
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
35.2 not assigned.not annotate