Gene: Solyc12g013880.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g013880.2
  • Transcript Identifier Solyc12g013880.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 4710785-4722819 : negative

Gene Family Information

  • ID HOM05D005820
  • #Genes/#Species 134/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g013880.2.1
  • uniprot A0A3Q7J599
  • gene_id Solyc12g013880

Descriptions

  • Description Origin recognition complex subunit 3 (AHRD V3.3 *** A0A2U1N3V6_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication
GO:0006267
IBA
GOA Databasepre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270
IBA
GOA DatabaseDNA replication initiation
GO:0009744
ISO
PLAZA Integrative Orthologyresponse to sucrose Os10g0402200
GO:0048527
ISO
PLAZA Integrative Orthologylateral root development Os10g0402200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003688
IBA
GOA DatabaseDNA replication origin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G16690

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005664
IBA
IEA
GOA Databasenuclear origin of replication recognition complex
GO:0005664
IEA
InterPronuclear origin of replication recognition complex
GO:0005634
IEA
GOA Databasenucleus
GO:0031261
IBA
GOA DatabaseDNA replication preinitiation complex
GO:0005656
IBA
GOA Databasenuclear pre-replicative complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040855 ORC3, winged helix C-terminal
IPR020795 Origin recognition complex, subunit 3
Mapman id Description
13.2.1.1.3 Cell cycle organisation.DNA replication.preinitiation.origin recognition complex.component ORC3