Gene: Solyc12g008890.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g008890.3
- Transcript Identifier Solyc12g008890.3.1
- Gene Type Coding gene
- Location SL4.0ch12 : 2252617-2255796 : negative
Gene Family Information
- ID HOM05D005251
- #Genes/#Species 144/94
- Phylogenetic origin
- ID ORTHO05D006680
- #Genes/#Species 139/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc12g008890.3.1
- uniprot A0A3Q7J3L1
- gene_id Solyc12g008890
Descriptions
- Description Zinc finger CCCH domain-containing protein 64-like (AHRD V3.3 *-* A0A2K3NZT0_TRIPR)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity | |
| GO:0006487 | IEA | GOA Database | protein N-linked glycosylation | |
| GO:0009690 | IEA | GOA Database | cytokinin metabolic process | |
| GO:0000398 | IBA | GOA Database | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019139 | IEA | GOA Database | cytokinin dehydrogenase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0071949 | IEA | GOA Database | FAD binding | |
| GO:0050660 | IEA | GOA Database | flavin adenine dinucleotide binding | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0061632 | IBA | GOA Database | RNA lariat debranching enzyme activator activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0034998 | IEA | GOA Database | oligosaccharyltransferase I complex | |
| GO:0071014 | IBA | GOA Database | post-mRNA release spliceosomal complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR040194 | Cwf19-like protein |
| Mapman id | Description |
|---|---|
| 15.5.16 | RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF) |