Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g008890.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 1.6e-70 269.2 127 100.0
Sopen12g003810 Solanum pennellii HOM05D005251 ORTHO05D006680 1.4e-63 246.1 117 99.1
PGSC0003DMG400000278 Solanum tuberosum HOM05D005251 ORTHO05D006680 3.5e-62 241.5 117 96.6
CAN.G1241.24 Capsicum annuum HOM05D005251 ORTHO05D006680 7.3e-60 233.8 117 93.2
Nn8g38856 Nelumbo nucifera HOM05D005251 ORTHO05D006680 2.0e-49 199.1 117 71.8
CSS0048193 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 2.6e-49 198.7 117 76.1
Actinidia39715 Actinidia chinensis HOM05D005251 ORTHO05D006680 5.8e-49 197.6 117 76.1
SGA_v2.0_scaffold21G09392 Striga asiatica HOM05D005251 ORTHO05D006680 7.6e-49 197.2 117 76.9
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 1.3e-48 196.4 117 74.4
Cc06_g11450 Coffea canephora HOM05D005251 ORTHO05D006680 2.2e-48 195.7 113 77.9
MSTRG.10560 Avicennia marina HOM05D005251 ORTHO05D006680 4.9e-48 194.5 117 75.2
Rhsim05G0020500 Rhododendron simsii HOM05D005251 ORTHO05D006680 4.9e-48 194.5 117 76.1
GSVIVG01015197001 Vitis vinifera HOM05D005251 ORTHO05D006680 8.4e-48 193.7 117 75.2
CSS0047543 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 1.1e-47 193.4 117 74.4
Sc18g0002110 Simmondsia chinensis HOM05D005251 ORTHO05D006680 1.1e-47 193.4 117 74.4
Lj4g0006207 Lotus japonicus HOM05D005251 ORTHO05D006680 1.9e-47 192.6 117 76.1
Dinv36771 Davidia involucrata HOM05D005251 ORTHO05D006680 2.4e-47 192.2 117 73.5
Prupe.7G209200 Prunus persica HOM05D005251 ORTHO05D006680 2.4e-47 192.2 117 71.8
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 3.2e-47 191.8 117 75.2
Psat4g015200 Pisum sativum HOM05D005251 ORTHO05D006680 3.2e-47 191.8 117 75.2
COL.COLO4_18196 Corchorus olitorius HOM05D005251 ORTHO05D006680 4.2e-47 191.4 117 70.1
QL02p062545 Quercus lobata HOM05D005251 ORTHO05D006680 5.4e-47 191.0 117 74.4
arahy.Tifrunner.gnm1.ann1.Y01GTZ Arachis hypogaea HOM05D005251 ORTHO05D006680 7.1e-47 190.7 115 74.8
PSO210G1153 Papaver somniferum HOM05D005251 ORTHO05D006680 9.3e-47 190.3 117 72.6
RcHm_v2.0_Chr2g0093421 Rosa chinensis HOM05D005251 ORTHO05D006680 1.2e-46 189.9 117 71.8
Eucgr.C00887 Eucalyptus grandis HOM05D005251 ORTHO05D006680 1.6e-46 189.5 117 70.1
FvH4_1g07540 Fragaria vesca HOM05D005251 ORTHO05D006680 2.1e-46 189.1 117 71.8
FAN26G3339 Fragaria x ananassa HOM05D005251 ORTHO05D006680 2.1e-46 189.1 117 71.8
PGR142G3350 Punica granatum HOM05D005251 ORTHO05D006680 2.1e-46 189.1 117 72.6
TAR624G0724 Trochodendron aralioides HOM05D005251 ORTHO05D006680 2.7e-46 188.7 117 72.6
FAN19G0073 Fragaria x ananassa HOM05D005251 ORTHO05D006680 3.5e-46 188.3 117 71.8
Ciclev10010506m.g Citrus clementina HOM05D005251 ORTHO05D006680 4.6e-46 188.0 117 71.8
FAN28G0072 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.6e-46 188.0 117 71.8
Manes.03G034200 Manihot esculenta HOM05D005251 ORTHO05D006680 6.0e-46 187.6 117 70.1
PSO210G7113 Papaver somniferum HOM05D005251 ORTHO05D006680 6.0e-46 187.6 117 71.8
arahy.Tifrunner.gnm1.ann1.V18GKH Arachis hypogaea HOM05D005251 ORTHO05D006680 7.8e-46 187.2 115 74.8
Glyma.17G054700 Glycine max HOM05D005251 ORTHO05D006680 7.8e-46 187.2 117 73.5
Migut.L01497 Erythranthe guttata HOM05D005251 ORTHO05D006680 1.0e-45 186.8 117 73.5
FAN26G1479 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.3e-45 186.4 117 70.9
Sabra06G0120400 Salix brachista HOM05D005251 ORTHO05D006680 1.3e-45 186.4 121 68.6
Atru.BG.14.p Acer truncatum HOM05D005251 ORTHO05D006680 1.7e-45 186.0 116 69.8
CiPaw.03G215300 Carya illinoinensis HOM05D005251 ORTHO05D006680 1.7e-45 186.0 117 70.9
FAN23G1060 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.7e-45 186.0 117 70.9
Thecc.09G088600 Theobroma cacao HOM05D005251 ORTHO05D006680 2.3e-45 185.7 117 68.4
MELO3C015476.2 Cucumis melo HOM05D005251 ORTHO05D006680 3.0e-45 185.3 117 69.2
TWI34G0442 Tripterygium wilfordii HOM05D005251 ORTHO05D006680 3.0e-45 185.3 117 71.8
HPP92_009143 Vanilla planifolia HOM05D005251 ORTHO05D006680 3.0e-45 185.3 117 69.2
Cpa.g.sc61.41 Carica papaya HOM05D005251 ORTHO05D006680 5.1e-45 184.5 117 69.2
Lalb_Chr12g0199801 Lupinus albus HOM05D005251 ORTHO05D006680 6.6e-45 184.1 119 73.9
Potri.006G152100 Populus trichocarpa HOM05D005251 ORTHO05D006680 6.6e-45 184.1 120 68.3
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 8.7e-45 183.7 117 69.2
Gohir.D06G071400 Gossypium hirsutum HOM05D005251 ORTHO05D006680 8.7e-45 183.7 117 66.7
Gorai.010G083200 Gossypium raimondii HOM05D005251 ORTHO05D006680 8.7e-45 183.7 117 66.7
AUR62033961 Chenopodium quinoa HOM05D005251 ORTHO05D006680 1.1e-44 183.3 116 70.7
CsaV3_1G040480 Cucumis sativus L. HOM05D005251 ORTHO05D006680 1.1e-44 183.3 117 68.4
Gohir.A06G072900 Gossypium hirsutum HOM05D005251 ORTHO05D006680 1.5e-44 183.0 117 66.7
Phvul.003G136700 Phaseolus vulgaris HOM05D005251 ORTHO05D006680 1.5e-44 183.0 117 70.9
AUR62029068 Chenopodium quinoa HOM05D005251 ORTHO05D006680 1.9e-44 182.6 116 69.8
MD02G1080200 Malus domestica HOM05D005251 ORTHO05D006680 1.9e-44 182.6 118 70.3
Glyma.13G104400 Glycine max HOM05D005251 ORTHO05D006680 2.5e-44 182.2 123 69.9
Lsat_1_v5_gn_8_87701 Lactuca sativa HOM05D005251 ORTHO05D006680 3.3e-44 181.8 117 69.2
Medtr4g126260 Medicago truncatula HOM05D005251 ORTHO05D006680 3.3e-44 181.8 118 74.6
AT5G56900 Arabidopsis thaliana HOM05D005251 ORTHO05D006680 4.3e-44 181.4 117 70.9
Sed0019984 Sechium edule HOM05D005251 ORTHO05D006680 5.6e-44 181.0 117 66.7
THA.LOC104817759 Tarenaya hassleriana HOM05D005251 ORTHO05D006680 9.6e-44 180.3 117 69.2
Ah.09g228240 Amaranthus hybridus HOM05D005251 ORTHO05D006680 1.3e-43 179.9 116 68.1
AL8G32750 Arabidopsis lyrata HOM05D005251 ORTHO05D006680 2.8e-43 178.7 117 69.2
HanXRQChr06g0178551 Helianthus annuus HOM05D005251 ORTHO05D006680 3.6e-43 178.3 117 66.7
Aa31LG3G12780 Aethionema arabicum HOM05D005251 ORTHO05D006680 6.2e-43 177.6 120 67.5
BcaC04g20043 Brassica carinata HOM05D005251 ORTHO05D006680 6.2e-43 177.6 117 69.2
C09p48540 Brassica napus HOM05D005251 ORTHO05D006680 6.2e-43 177.6 117 69.2
BolC9t57695H Brassica oleracea HOM05D005251 ORTHO05D006680 6.2e-43 177.6 117 69.2
BcaB08g36046 Brassica carinata HOM05D005251 ORTHO05D006680 8.1e-43 177.2 117 69.2
Carub.0008s1736 Capsella rubella HOM05D005251 ORTHO05D006680 8.1e-43 177.2 117 69.2
Thhalv10013022m.g Eutrema salsugineum HOM05D005251 ORTHO05D006680 8.1e-43 177.2 117 69.2
Duzib150G0576 Durio zibethinus HOM05D005251 ORTHO05D006680 2.4e-42 175.6 117 65.8
EL10Ac8g19209 Beta vulgaris HOM05D005251 ORTHO05D006680 3.1e-42 175.3 116 69.0
A10p14170 Brassica napus HOM05D005251 ORTHO05D006680 3.1e-42 175.3 117 67.5
unitig_8.g4690 Utricularia gibba HOM05D005251 ORTHO05D006680 6.9e-42 174.1 113 69.9
Sp6g18620 Schrenkiella parvula HOM05D005251 ORTHO05D006680 9.0e-42 173.7 117 68.4
TPR.G9472 Trifolium pratense HOM05D005251 ORTHO05D006680 9.0e-42 173.7 133 65.4
ATR0789G123 Amborella trichopoda HOM05D005251 ORTHO05D006680 8.4e-40 167.2 122 62.3
Aqoxy7G04044 Aquilegia oxysepala HOM05D005251 ORTHO05D006680 8.4e-40 167.2 117 64.1
Oeu018416.2 Olea europaea HOM05D005251 ORTHO05D006680 1.4e-39 166.4 99 77.8
Cfa003082 Carpinus fangiana HOM05D005251 ORTHO05D006680 7.1e-39 164.1 117 65.0
Lj4A303G24 Lonicera japonica HOM05D005251 ORTHO05D006680 1.6e-38 162.9 92 75.0
vmacro17242 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 1.6e-38 162.9 96 78.1
VMungo1215G2738 Vigna mungo HOM05D005251 ORTHO05D006680 7.4e-36 154.1 100 71.0
MBI04_g31157_MAGBIO Magnolia biondii HOM05D005251 ORTHO05D006680 1.4e-34 149.8 92 70.7
ClCG03G015560 Citrullus lanatus HOM05D005251 ORTHO05D006680 3.1e-34 148.7 96 66.7
AagrBONN_evm.TU.Sc2ySwM_228.1764 Anthoceros agrestis HOM05D005251 ORTHO05D006680 5.3e-34 147.9 113 55.8
C09p50860 Brassica napus HOM05D005251 ORTHO05D006680 1.2e-33 146.7 98 66.3
MD15G1207700 Malus domestica HOM05D005251 ORTHO05D006680 2.0e-33 146.0 93 69.9
BraA10t43510Z Brassica rapa HOM05D005251 ORTHO05D006680 5.8e-33 144.4 94 66.0
Pp3c16_14300 Physcomitrium patens HOM05D005251 ORTHO05D006680 2.9e-32 142.1 113 56.6
Mapoly0009s0116 Marchantia polymorpha HOM05D005251 ORTHO05D006680 2.1e-30 136.0 113 54.0
Os09g0364000 Oryza sativa ssp. japonica HOM05D005251 ORTHO05D006680 4.6e-30 134.8 120 53.3
SMO147G0126 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 8.2e-27 124.0 117 49.6
SMO273G0018 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 2.4e-26 122.5 111 51.4
CANSAT56G1459 Cannabis sativa HOM05D005251 ORTHO05D006680 1.2e-22 110.2 63 73.0
CBR_g54012 Chara braunii HOM05D005251 ORTHO05D006680 1.3e-16 90.1 110 42.7
BcaNung02827 Brassica carinata HOM05D005251 ORTHO05D006680 2.2e-16 89.4 73 54.8
BcaNung03955 Brassica carinata HOM05D005251 ORTHO05D006680 2.2e-16 89.4 73 54.8
Cre07.g338900 Chlamydomonas reinhardtii HOM05D005251 ORTHO05D006680 8.5e-16 87.4 88 53.4
PRCOL_00000275 Prasinoderma coloniale HOM05D005251 ORTHO05D006680 1.4e-15 86.7 114 43.0
MCO16G282 Micromonas commoda HOM05D005251 ORTHO05D006680 1.7e-11 73.2 108 38.0
BolC9t57946H Brassica oleracea HOM05D005251 ORTHO05D006680 2.2e-11 72.8 51 62.7
Actinidia25250 Actinidia chinensis HOM05D005251 ORTHO05D006680 1.5e-09 66.6 47 63.8
Solyc05g032650.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 2.0e-09 66.2 39 79.5
C06p07130 Brassica napus HOM05D005251 ORTHO05D006680 5.9e-09 64.7 41 65.9
SalBow5G3528 Salvia bowleyana HOM05D000147 ORTHO05D005311 2.9e-08 62.4 36 72.2


User provided reference genes

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