Gene: Solyc12g005280.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g005280.3
  • Transcript Identifier Solyc12g005280.3.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 185246-189559 : positive

Gene Family Information

  • ID HOM05D002586
  • #Genes/#Species 264/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g005280.3.1
  • uniprot A0A3Q7J2F8
  • gene_id Solyc12g005280

Descriptions

  • Description tRNA (guanine(37)-N1)-methyltransferase (AHRD V3.3 *** A0A1U8FMJ3_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030488
IBA
IEA
GOA DatabasetRNA methylation
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0032259
IEA
GOA Databasemethylation
GO:0002939
IBA
GOA DatabasetRNA N1-guanine methylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009019
IBA
IEA
GOA DatabasetRNA (guanine-N1-)-methyltransferase activity
GO:0052906
IEA
GOA DatabasetRNA (guanine(37)-N(1))-methyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008175
IBA
GOA DatabasetRNA methyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005759
IEA
GOA Databasemitochondrial matrix
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR030382 SAM-dependent methyltransferase TRM5/TYW2-type
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
Mapman id Description
16.5.7.10 RNA processing.RNA modification.tRNA methylation.tRNA guanosine-methyltransferase (TRM5)