Gene: Solyc11g071370.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g071370.1
  • Transcript Identifier Solyc11g071370.1.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 52942905-52944428 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g071370.1.1
  • uniprot A0A3Q7J090
  • gene_id Solyc11g071370

Descriptions

  • Description Pentatricopeptide repeat (AHRD V3.3 *** A0A200QJM0_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009451
IBA
GOA DatabaseRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003723
IBA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0043231
IBA
GOA Databaseintracellular membrane-bounded organelle
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G05750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.3.3.4.41 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (CLB19)