Gene: Solyc11g065670.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g065670.1
  • Transcript Identifier Solyc11g065670.1.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 49260370-49260870 : negative

Gene Family Information

  • ID HOM05D001565
  • #Genes/#Species 408/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g065670.1.1
  • uniprot K4DAA0
  • gene_id Solyc11g065670

Descriptions

  • Description 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT2G37190
GO:0006412
IBA
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G53430
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G53430
GO:0008270
ISO
PLAZA Integrative Orthologyzinc ion binding AT2G37190
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0070180
IBA
GOA Databaselarge ribosomal subunit rRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G37190
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G37190
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G37190
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G37190
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G37190
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G37190
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G37190
GO:0015934
IBA
GOA Databaselarge ribosomal subunit
GO:0022625
IBA
GOA Databasecytosolic large ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily
IPR000911 Ribosomal protein L11/L12
IPR036769 Ribosomal protein L11, C-terminal domain superfamily
IPR020784 Ribosomal protein L11, N-terminal
IPR020783 Ribosomal protein L11, C-terminal
Mapman id Description
17.1.2.1.12 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL12