Gene: AT2G37190

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G37190
  • Transcript Identifier AT2G37190.1
  • Gene Type Coding gene
  • Location Chr2 : 15619559-15620059 : negative

Gene Family Information

  • ID HOM05D001565
  • #Genes/#Species 408/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G37190.1
  • uniprot P50883

Descriptions

  • Description Ribosomal protein L11 family protein
  • Computational description Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome, zinc ion binding; INVOLVED IN: response to cold, ribosome biogenesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1580 Blast hits to 1580 proteins in 592 species: Archae - 303; Bacteria - 410; Metazoa - 359; Fungi - 167; Plants - 131; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
IEP
GOA Databaseresponse to cold
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IBA
Gene Ontologytranslation1
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IDA
GOA Databasezinc ion binding
GO:0008270
HDA
Gene Ontologyzinc ion binding2
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA
Gene OntologymRNA binding3
GO:0070180
IBA
Gene Ontologylarge ribosomal subunit rRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus4
GO:0022625
IDA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
Gene Ontologycytosolic large ribosomal subunit1 5
GO:0005773
IDA
GOA Databasevacuole
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus6
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast7
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome8
GO:0005829
IDA
GOA Databasecytosol
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma9
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005794
RCA
Gene OntologyGolgi apparatus10
GO:0000325
HDA
Gene Ontologyplant-type vacuole11
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005783
HDA
Gene Ontologyendoplasmic reticulum12
GO:0015934
IBA
Gene Ontologylarge ribosomal subunit1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036769 Ribosomal protein L11, C-terminal domain superfamily
IPR020784 Ribosomal protein L11, N-terminal
IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily
IPR000911 Ribosomal protein L11/L12
IPR020783 Ribosomal protein L11, C-terminal
Mapman id Description
17.1.2.1.12 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL12