Gene: Solyc11g062220.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g062220.2
- Transcript Identifier Solyc11g062220.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 47086471-47096916 : positive
Gene Family Information
- ID HOM05D000706
- #Genes/#Species 813/97
- Phylogenetic origin
- ID ORTHO05D001633
- #Genes/#Species 378/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc11g062220.2.1
- uniprot A0A3Q7JN32
- gene_id Solyc11g062220
Descriptions
- Description Zinc finger CCCH domain-containing protein 44 (AHRD V3.3 *-* A0A2G3B9D7_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010964 | ISO | PLAZA Integrative Orthology | regulation of heterochromatin assembly by small RNA | AT2G16485 |
| GO:0032776 | ISO | PLAZA Integrative Orthology | DNA methylation on cytosine | AT2G16485 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:1990269 | IBA | GOA Database | RNA polymerase II C-terminal domain phosphoserine binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G16485 |
| GO:0042393 | ISO | PLAZA Integrative Orthology | histone binding | AT2G16485 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016593 | IBA | GOA Database | Cdc73/Paf1 complex | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G16485 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G16485 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |