Gene: Solyc11g039880.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g039880.2
- Transcript Identifier Solyc11g039880.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 40253019-40298268 : positive
Gene Family Information
- ID HOM05D004110
- #Genes/#Species 171/96
- Phylogenetic origin
- ID ORTHO05D004810
- #Genes/#Species 171/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc11g039880.2.1
- uniprot A0A3Q7IV60
- gene_id Solyc11g039880
Descriptions
- Description Nucleoporin (DUF3414) (AHRD V3.3 *** F4JUG3_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006405 | IBA | GOA Database | RNA export from nucleus | |
| GO:0006606 | IBA | GOA Database | protein import into nucleus |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017056 | IBA IEA | GOA Database | structural constituent of nuclear pore | |
| GO:0017056 | IEA | InterPro | structural constituent of nuclear pore |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0044611 | IBA | GOA Database | nuclear pore inner ring |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044840 | Nucleoporin Nup188 |
| Mapman id | Description |
|---|---|
| 23.5.1.1.2.2 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.scaffold nucleoporin (NUP188) |