Gene: Solyc11g027810.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g027810.3
  • Transcript Identifier Solyc11g027810.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 18096109-18098511 : negative

Gene Family Information

  • ID HOM05D002874
  • #Genes/#Species 241/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g027810.3.1
  • uniprot A0A3Q7IUC5
  • gene_id Solyc11g027810

Descriptions

  • Description E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) (AHRD V3.3 *** Q93WJ5_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005783
IEA
GOA Databaseendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038896 E3 ubiquitin-protein ligase RNF170
IPR010652 Domain of unknown function DUF1232
Mapman id Description
35.1 not assigned.annotated