Gene: Solyc11g005220.2

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc11g005220.2
Transcript Identifier Solyc11g005220.2.1
Gene Type Coding gene
Location SL4.0ch11 : 201940-206389 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000849
#Genes/#Species 704/100
Phylogenetic origin

ID ORTHO05D001720
#Genes/#Species 365/99
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid Solyc11g005220.2.1
uniprot A0A3Q7INE6
gene_id Solyc11g005220

Descriptions

Short descriptions
Ortholog descriptions

Description AP complex subunit sigma (AHRD V3.3 *** A0A2G2Y783_CAPAN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0015031	IEA	GOA Database	protein transport
GO:0015031	IEA	InterPro	protein transport
GO:0016192	IBA IEA	GOA Database	vesicle-mediated transport
GO:0016192	IEA	InterPro	vesicle-mediated transport
GO:0006886	IEA	GOA Database	intracellular protein transport

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0035615	IEA	GOA Database	clathrin adaptor activity
GO:0035615	IEA	InterPro	clathrin adaptor activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030121	IEA	GOA Database	AP-1 adaptor complex
GO:0030121	IEA	InterPro	AP-1 adaptor complex
GO:0016020	IEA	GOA Database	membrane
GO:0030117	IEA	GOA Database	membrane coat
GO:0043231	IBA	GOA Database	intracellular membrane-bounded organelle

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR016635	Adaptor protein complex, sigma subunit
IPR044733	AP-1 complex subunit sigma
IPR011012	Longin-like domain superfamily
IPR022775	AP complex, mu/sigma subunit

Mapman id	Description
22.3.1.2.4	Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.small subunit sigma (AP1S)