Gene: Solyc10g085750.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g085750.2
  • Transcript Identifier Solyc10g085750.2.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 63979675-63984583 : negative

Gene Family Information

  • ID HOM05D000428
  • #Genes/#Species 1201/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g085750.2.1
  • uniprot A0A3Q7JGW9
  • gene_id Solyc10g085750

Descriptions

  • Description Polyadenylate-binding protein (AHRD V3.3 *** A0A2G3BFC7_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0016788
IEA
GOA Databasehydrolase activity, acting on ester bonds
GO:0008143
IBA
GOA Databasepoly(A) binding
GO:0008266
IBA
GOA Databasepoly(U) RNA binding
GO:0003730
IBA
GOA DatabasemRNA 3'-UTR binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990904
IBA
GOA Databaseribonucleoprotein complex
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
IBA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002004 Polyadenylate-binding protein/Hyperplastic disc protein
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR006515 Polyadenylate binding protein, human types 1, 2, 3, 4
IPR036053 PABC (PABP) domain
Mapman id Description
17.4.2.5 Protein biosynthesis.translation initiation.mRNA loading.mRNA poly-A-tail binding factor (PABP)