Gene: Solyc10g085200.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc10g085200.2
- Transcript Identifier Solyc10g085200.2.1
- Gene Type Coding gene
- Location SL4.0ch10 : 63626828-63630160 : positive
Gene Family Information
- ID HOM05D003802
- #Genes/#Species 182/96
- Phylogenetic origin
- ID ORTHO05D004829
- #Genes/#Species 170/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc10g085200.2.1
- uniprot A0A3Q7IMI8
- gene_id Solyc10g085200
Descriptions
- Description Acyl-CoA oxidase/dehydrogenase (AHRD V3.3 *** A0A200PWV2_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006635 | IEA | GOA Database | fatty acid beta-oxidation | |
| GO:0006635 | IEA | InterPro | fatty acid beta-oxidation | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G51840 |
| GO:0046459 | ISO | PLAZA Integrative Orthology | short-chain fatty acid metabolic process | AT3G51840 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003995 | IEA | GOA Database | acyl-CoA dehydrogenase activity | |
| GO:0003995 | IEA | InterPro | acyl-CoA dehydrogenase activity | |
| GO:0016627 | IEA | GOA Database | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0016627 | IEA | InterPro | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0050660 | IEA | GOA Database | flavin adenine dinucleotide binding | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0003997 | ISO | PLAZA Integrative Orthology | acyl-CoA oxidase activity | AT3G51840 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005777 | IBA | GOA Database | peroxisome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045008 | Acyl-coenzyme A oxidase 4-like |
| IPR037069 | Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily |
| IPR009100 | Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily |
| IPR009075 | Acyl-CoA dehydrogenase/oxidase C-terminal |
| IPR006091 | Acyl-CoA oxidase/dehydrogenase, central domain |
| IPR036250 | Acyl-CoA dehydrogenase-like, C-terminal |
| IPR013786 | Acyl-CoA dehydrogenase/oxidase, N-terminal |
| Mapman id | Description |
|---|---|
| 5.7.3.2.1 | Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.acyl CoA oxidase (ACX) |