Gene: Solyc10g084980.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc10g084980.3
- Transcript Identifier Solyc10g084980.3.1
- Gene Type Coding gene
- Location SL4.0ch10 : 63484548-63486401 : negative
Gene Family Information
- ID HOM05D001242
- #Genes/#Species 502/92
- Phylogenetic origin
- ID ORTHO05D001089
- #Genes/#Species 493/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc10g084980.3.1
- uniprot A0A3Q7INQ0
- gene_id Solyc10g084980
Descriptions
- Description Copper transporter (AHRD V3.3 *-* E9LK39_VITVI)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0098705 | ISO | PLAZA Integrative Orthology | copper ion import across plasma membrane | AT3G46900 |
| GO:0048235 | ISO | PLAZA Integrative Orthology | pollen sperm cell differentiation | AT5G59030 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT5G59030 |
| GO:0006878 | IBA IEA | GOA Database | cellular copper ion homeostasis | |
| GO:0035434 | IEA | GOA Database | copper ion transmembrane transport | |
| GO:0035434 | IEA | InterPro | copper ion transmembrane transport | |
| GO:0006825 | IEA | GOA Database | copper ion transport | |
| GO:0006811 | IEA | GOA Database | ion transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | Os01g0770700 |
| GO:0015089 | ISO | PLAZA Integrative Orthology | high-affinity copper ion transmembrane transporter activity | AT3G46900 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os01g0770700 |
| GO:0005375 | IBA IEA | GOA Database | copper ion transmembrane transporter activity | |
| GO:0005375 | IEA | InterPro | copper ion transmembrane transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | IBA | GOA Database | plasma membrane | |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G26975 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007274 | Ctr copper transporter |
| Mapman id | Description |
|---|---|
| 24.3.12 | Solute transport.channels.copper cation channel (COPT) |
| 25.4.3.2.1 | Nutrient uptake.metal homeostasis.copper.uptake transport.copper transporter (COPT) |