Gene: AT3G46900
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G46900
- Transcript Identifier AT3G46900.1
- Gene Type Coding gene
- Location Chr3 : 17268887-17269363 : positive
Gene Family Information
- ID HOM05D001242
- #Genes/#Species 502/92
- Phylogenetic origin
- ID ORTHO05D001089
- #Genes/#Species 493/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G46900.1
- symbol COPT2
- uniprot Q9STG2
Descriptions
- Description copper transporter 2
- Computational description copper transporter 2 (COPT2); FUNCTIONS IN: copper ion transmembrane transporter activity, high affinity copper ion transmembrane transporter activity; INVOLVED IN: copper ion transport, high-affinity copper ion transport; LOCATED IN: anchored to plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: Ctr copper transporter family (TAIR:AT2G26975.1); Has 445 Blast hits to 445 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 45; Plants - 164; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006825 | IEA | GOA Database | copper ion transport | |
| GO:0035434 | IEA | GOA Database | copper ion transmembrane transport | |
| GO:0035434 | IEA | InterPro | copper ion transmembrane transport | |
| GO:0006811 | IEA | GOA Database | ion transport | |
| GO:0006878 | IBA | Gene Ontology | cellular copper ion homeostasis | 1 |
| GO:0098705 | IGI | Gene Ontology | copper ion import across plasma membrane | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | Os01g0770700 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os01g0770700 |
| GO:0005375 | IEA | GOA Database | copper ion transmembrane transporter activity | |
| GO:0005375 | ISS, IBA | Gene Ontology | copper ion transmembrane transporter activity | 1 |
| GO:0005375 | IEA | InterPro | copper ion transmembrane transporter activity | |
| GO:0015089 | IGI | Gene Ontology | high-affinity copper ion transmembrane transporter activity | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005886 | IBA | Gene Ontology | plasma membrane | 1 |
| GO:0046658 | HDA | Gene Ontology | anchored component of plasma membrane | 3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007274 | Ctr copper transporter |
| Mapman id | Description |
|---|---|
| 24.3.12 | Solute transport.channels.copper cation channel (COPT) |
| 25.4.3.2.1 | Nutrient uptake.metal homeostasis.copper.uptake transport.copper transporter (COPT) |