Gene: Solyc10g083280.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc10g083280.4
- Transcript Identifier Solyc10g083280.4.1
- Gene Type Coding gene
- Location SL4.0ch10 : 62268659-62271534 : positive
Gene Family Information
- ID HOM05D000972
- #Genes/#Species 617/100
- Phylogenetic origin
- ID ORTHO05D001783
- #Genes/#Species 356/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc10g083280.4.1
- uniprot A0A3Q7IM00
- gene_id Solyc10g083280
Descriptions
- Description Ribosomal protein S11 (AHRD V3.3 *** A0A200Q0S8_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G36160 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G36160 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G36160 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT2G36160 |
| GO:0022627 | ISO | PLAZA Integrative Orthology | cytosolic small ribosomal subunit | AT2G36160 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G36160 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G36160 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G11510 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G36160 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT2G36160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.3.1.15 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS14 |