Gene: AT2G36160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G36160
  • Transcript Identifier AT2G36160.1
  • Gene Type Coding gene
  • Location Chr2 : 15169925-15171159 : positive

Gene Family Information

  • ID HOM05D000972
  • #Genes/#Species 617/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G36160.1
  • uniprot Q9SIH0

Descriptions

  • Description Ribosomal protein S11 family protein
  • Computational description Ribosomal protein S11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2901 species: Archae - 250; Bacteria - 4863; Metazoa - 587; Fungi - 162; Plants - 736; Viruses - 0; Other Eukaryotes - 2176 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IBA
Gene Ontologytranslation1
GO:0006412
IEA
InterProtranslation
GO:0000028
IBA
Gene Ontologyribosomal small subunit assembly1
GO:0000462
IBA
Gene Ontologymaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0048027
IBA
Gene OntologymRNA 5'-UTR binding1
GO:0070181
IBA
Gene Ontologysmall ribosomal subunit rRNA binding1
GO:0003729
IDA
Gene OntologymRNA binding2
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G11510
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4
GO:0005829
IDA
GOA Databasecytosol
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome5
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 6
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005783
HDA
Gene Ontologyendoplasmic reticulum7
GO:0000325
HDA
Gene Ontologyplant-type vacuole8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001971 Ribosomal protein S11
IPR036967 Ribosomal protein S11 superfamily
Mapman id Description
17.1.3.1.15 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS14