Gene: Solyc10g080100.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g080100.3
  • Transcript Identifier Solyc10g080100.3.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 60597006-60606715 : negative

Gene Family Information

  • ID HOM05D000942
  • #Genes/#Species 637/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g080100.3.1
  • uniprot A0A3Q7JFB7
  • gene_id Solyc10g080100

Descriptions

  • Description Villin (AHRD V3.3 *** A0A2P5EN25_TREOI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051017
ISO
PLAZA Integrative Orthologyactin filament bundle assembly AT3G57410
GO:0009630
ISO
PLAZA Integrative Orthologygravitropism Os03g0356700
GO:2000012
ISO
PLAZA Integrative Orthologyregulation of auxin polar transport Os03g0356700
GO:0007015
ISO
PLAZA Integrative Orthologyactin filament organization Os03g0356700
GO:0001558
ISO
PLAZA Integrative Orthologyregulation of cell growth Os03g0356700
GO:0051014
IBA
GOA Databaseactin filament severing
GO:0007010
IEA
GOA Databasecytoskeleton organization
GO:0007010
IEA
InterProcytoskeleton organization
GO:0051693
IEA
GOA Databaseactin filament capping

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G57410
GO:0003779
IEA
GOA Databaseactin binding
GO:0003779
IEA
InterProactin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G41740
GO:0051015
IEA
GOA Databaseactin filament binding
GO:0051015
IEA
InterProactin filament binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G57410
GO:0005884
ISO
PLAZA Integrative Orthologyactin filament AT3G57410
GO:0032432
ISO
PLAZA Integrative Orthologyactin filament bundle Os03g0356700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036886 Villin headpiece domain superfamily
IPR003128 Villin headpiece
IPR007123 Gelsolin-like domain
IPR029006 ADF-H/Gelsolin-like domain superfamily
IPR007122 Villin/Gelsolin
Mapman id Description
20.2.2.5 Cytoskeleton organisation.microfilament network.actin polymerisation.villin actin-crosslinking factor