Gene: Solyc09g089620.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g089620.1
  • Transcript Identifier Solyc09g089620.1.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 65482419-65483279 : negative

Gene Family Information

  • ID HOM05D000244
  • #Genes/#Species 1727/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g089620.1.1
  • uniprot A0A3Q7I707
  • gene_id Solyc09g089620

Descriptions

  • Description AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2G3BF72_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:1900425
ISO
PLAZA Integrative Orthologynegative regulation of defense response to bacterium AT4G14465
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G04570
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G14465
GO:0045824
ISO
PLAZA Integrative Orthologynegative regulation of innate immune response AT4G14465
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT4G14465

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003680
IBA
IEA
GOA Databaseminor groove of adenine-thymine-rich DNA binding
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding
GO:0003700
IBA
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G14465
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT4G14465

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014476 AT-hook motif nuclear-localized protein 15-29
IPR005175 PPC domain
Mapman id Description
15.5.8.1 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-A transcription factor (AHL)