Gene: Solyc09g055920.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g055920.4
  • Transcript Identifier Solyc09g055920.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 42280990-42283769 : negative

Gene Family Information

  • ID HOM05D001724
  • #Genes/#Species 375/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g055920.4.1
  • uniprot A0A3Q7I135
  • gene_id Solyc09g055920

Descriptions

  • Description Poly(A)-specific ribonuclease PARN-like (AHRD V3.3 *** A0A2G3BM43_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090503
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, exonucleolytic
GO:1905392
ISO
PLAZA Integrative Orthologyplant organ morphogenesis AT3G25430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0000175
IBA
GOA Database3'-5'-exoribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006941 Ribonuclease CAF1
IPR012337 Ribonuclease H-like superfamily
IPR036397 Ribonuclease H superfamily
Mapman id Description
35.1 not assigned.annotated