Gene: Solyc09g055350.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g055350.3
  • Transcript Identifier Solyc09g055350.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 36139205-36174604 : positive

Gene Family Information

  • ID HOM05D000068
  • #Genes/#Species 3957/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g055350.3.1
  • uniprot A0A3Q7IXJ6
  • gene_id Solyc09g055350

Descriptions

  • Description ABC transporter ATP-binding protein (AHRD V3.3 *** A0A1Y1IJM1_KLENI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IBA
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0010288
ISO
PLAZA Integrative Orthologyresponse to lead ion AT5G58270
GO:0050790
ISO
PLAZA Integrative Orthologyregulation of catalytic activity AT5G58270
GO:0051276
ISO
PLAZA Integrative Orthologychromosome organization AT5G58270
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G58270
GO:0006777
ISO
PLAZA Integrative OrthologyMo-molybdopterin cofactor biosynthetic process AT5G58270
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G58270
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G58270
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G58270
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT5G58270
GO:0040014
ISO
PLAZA Integrative Orthologyregulation of multicellular organism growth AT5G58270
GO:0006879
IBA
GOA Databasecellular iron ion homeostasis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0042626
IBA
GOA DatabaseATPase-coupled transmembrane transporter activity
GO:0140359
IEA
GOA DatabaseABC-type transporter activity
GO:0140359
IEA
InterProABC-type transporter activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G28620
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G58270
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G58270
GO:0005743
IBA
GOA Databasemitochondrial inner membrane
GO:0016021
IBA
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036640 ABC transporter type 1, transmembrane domain superfamily
IPR003439 ABC transporter-like, ATP-binding domain
IPR011527 ABC transporter type 1, transmembrane domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR039421 Type 1 protein exporter
Mapman id Description
24.1.3.1.1 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter
7.11.2.3.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.export machinery.transport protein (ATM)