Gene: AT5G58270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G58270
  • Transcript Identifier AT5G58270.1
  • Gene Type Coding gene
  • Location Chr5 : 23562168-23567040 : positive

Gene Family Information

  • ID HOM05D000068
  • #Genes/#Species 3957/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G58270.1
  • symbol ABCB25
  • Alias ATATM3,ARABIDOPSIS THALIANA ABC TRANSPORTER OF THE MITOCHONDRION 3,ATM3,ABC transporter of the mitochondrion 3,STA1,STARIK 1
  • full_name ATP-binding cassette B25
  • uniprot Q9LVM1

Descriptions

  • Description ABC transporter of the mitochondrion 3
  • Computational description ABC transporter of the mitochondrion 3 (ATM3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter of the mitochondrion 1 (TAIR:AT4G28630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055072
IEA
GOA Databaseiron ion homeostasis
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IBA
Gene Ontologytransmembrane transport1
GO:0055085
IEA
InterProtransmembrane transport
GO:0006879
IMP, IGI
IBA
Gene Ontologycellular iron ion homeostasis1 2 3
GO:0006811
IEA
GOA Databaseion transport
GO:0040014
IGI
Gene Ontologyregulation of multicellular organism growth2
GO:0010288
IMP
Gene Ontologyresponse to lead ion4
GO:0046686
IMP
Gene Ontologyresponse to cadmium ion4
GO:0009555
IMP
Gene Ontologypollen development5
GO:0009658
IMP
Gene Ontologychloroplast organization5
GO:0010380
IMP
Gene Ontologyregulation of chlorophyll biosynthetic process5
GO:0048364
IMP
Gene Ontologyroot development5
GO:0050790
IMP
Gene Ontologyregulation of catalytic activity5
GO:0006777
IMP
Gene OntologyMo-molybdopterin cofactor biosynthetic process6
GO:0051276
IMP
Gene Ontologychromosome organization7

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042626
ISS, IBA
Gene OntologyATPase-coupled transmembrane transporter activity1
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0140359
IEA
Gene OntologyABC-type transporter activity
GO:0140359
IEA
InterProABC-type transporter activity
GO:0022857
ISS
Gene Ontologytransmembrane transporter activity8

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005743
IEA
GOA Databasemitochondrial inner membrane
GO:0005743
IBA
Gene Ontologymitochondrial inner membrane1
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IBA
Gene Ontologyintegral component of membrane1
GO:0016021
IEA
InterProintegral component of membrane
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope9
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast10
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, HDA
ISM
Gene Ontologymitochondrion3 11
GO:0009536
HDA
Gene Ontologyplastid12
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR036640 ABC transporter type 1, transmembrane domain superfamily
IPR003439 ABC transporter-like, ATP-binding domain
IPR011527 ABC transporter type 1, transmembrane domain
IPR039421 Type 1 protein exporter
Mapman id Description
24.1.3.1.1 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter
7.11.2.3.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.export machinery.transport protein (ATM)