Gene: Solyc09g031930.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g031930.3
  • Transcript Identifier Solyc09g031930.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 25819300-25826717 : negative

Gene Family Information

  • ID HOM05D001024
  • #Genes/#Species 592/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g031930.3.1
  • uniprot A0A3Q7IWX4
  • gene_id Solyc09g031930

Descriptions

  • Description KH domain-containing protein (AHRD V3.3 *** A0A2G2V929_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048024
IBA
GOA Databaseregulation of mRNA splicing, via spliceosome
GO:0048577
ISO
PLAZA Integrative Orthologynegative regulation of short-day photoperiodism, flowering Os03g0815700
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering Os03g0815700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding Os03g0815700
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G38610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G38610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004088 K Homology domain, type 1
IPR045071 KH domain-containing BBP-like
IPR004087 K Homology domain
IPR036612 K Homology domain, type 1 superfamily
IPR032377 STAR protein, homodimerisation region
Mapman id Description
35.1 not assigned.annotated