Gene: Solyc09g018730.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g018730.4
  • Transcript Identifier Solyc09g018730.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 16908596-16914501 : positive

Gene Family Information

  • ID HOM05D004513
  • #Genes/#Species 160/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g018730.4.1
  • uniprot A0A3Q7IWA6
  • gene_id Solyc09g018730

Descriptions

  • Description Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** A0A1U8E1K2_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010016
ISO
PLAZA Integrative Orthologyshoot system morphogenesis AT5G16310
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT5G16310
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT5G16310
GO:0016579
IBA
IEA
GOA Databaseprotein deubiquitination
GO:0016579
IEA
InterProprotein deubiquitination
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G65650
GO:0004843
IBA
IEA
GOA Databasethiol-dependent deubiquitinase
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G16310
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041507 Peptidase C12, C-terminal domain
IPR001578 Peptidase C12, ubiquitin carboxyl-terminal hydrolase
IPR038765 Papain-like cysteine peptidase superfamily
IPR036959 Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamily
IPR017390 Ubiquitinyl hydrolase, UCH37 type
Mapman id Description
19.2.3.1.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UCH deubiquitinase activities.deubiquitinase (UCH1/2)
19.2.3.3.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.deneddylase activities.hydrolase (UCH1/2)