Gene: Solyc09g008520.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g008520.4
  • Transcript Identifier Solyc09g008520.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 2037155-2045440 : negative

Gene Family Information

  • ID HOM05D001217
  • #Genes/#Species 514/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g008520.4.1
  • uniprot A0A3Q7HWX0
  • gene_id Solyc09g008520

Descriptions

  • Description Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein (AHRD V3.3 *** Q8RWG0_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IBA
GOA Databasepositive regulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003682
IBA
GOA Databasechromatin binding
GO:0000977
IBA
GOA DatabaseRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0042393
IBA
GOA Databasehistone binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G36720
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G36720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016181 Acyl-CoA N-acyltransferase
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR019787 Zinc finger, PHD-finger
IPR032308 Jas TPL-binding domain
IPR011011 Zinc finger, FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
Mapman id Description
35.1 not assigned.annotated