Gene: Solyc09g005143.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc09g005143.1
- Transcript Identifier Solyc09g005143.1.1
- Gene Type Coding gene
- Location SL4.0ch09 : 151268-153784 : positive
Gene Family Information
- ID HOM05D002095
- #Genes/#Species 318/96
- Phylogenetic origin
- ID ORTHO05D002058
- #Genes/#Species 323/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc09g005143.1.1
- gene_id Solyc09g005143
Descriptions
- Description E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *-* A0A1B1LUK2_VITPS)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT4G12570 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT4G12570 |
| GO:0042542 | ISO | PLAZA Integrative Orthology | response to hydrogen peroxide | AT4G12570 |
| GO:0016567 | ISO | PLAZA Integrative Orthology | protein ubiquitination | AT4G12570 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G12570 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G12570 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.1.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.HECT-type E3 ligase activities.monomeric E3 ubiquitin ligase (HECT) |