Gene: AT4G12570

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G12570
  • Transcript Identifier AT4G12570.1
  • Gene Type Coding gene
  • Location Chr4 : 7445585-7448819 : positive

Gene Family Information

  • ID HOM05D002095
  • #Genes/#Species 318/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G12570.1
  • symbol UPL5
  • uniprot Q9SU29

Descriptions

  • Description ubiquitin protein ligase 5
  • Computational description ubiquitin protein ligase 5 (UPL5); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.1); Has 13201 Blast hits to 8328 proteins in 676 species: Archae - 0; Bacteria - 15; Metazoa - 6234; Fungi - 1825; Plants - 2664; Viruses - 167; Other Eukaryotes - 2296 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
IBA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IDA
IBA
Gene Ontologyprotein ubiquitination1 2
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination1
GO:0045732
IBA
Gene Ontologypositive regulation of protein catabolic process1
GO:0042542
IEP
Gene Ontologyresponse to hydrogen peroxide2
GO:0010150
IMP
Gene Ontologyleaf senescence2
GO:0009753
IEP
Gene Ontologyresponse to jasmonic acid2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005515
IEA
InterProprotein binding
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity2
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0030246
IEA
GOA Databasecarbohydrate binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
IBA
Gene Ontologycytoplasm1 2
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000569 HECT domain
IPR000626 Ubiquitin-like domain
IPR035983 HECT, E3 ligase catalytic domain
IPR019956 Ubiquitin domain
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
19.2.2.1.4.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.HECT-type E3 ligase activities.monomeric E3 ubiquitin ligase (HECT)