Gene: Solyc08g082100.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g082100.3
  • Transcript Identifier Solyc08g082100.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 63111598-63116387 : positive

Gene Family Information

  • ID HOM05D005266
  • #Genes/#Species 143/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g082100.3.1
  • uniprot A0A3Q7HUB5
  • gene_id Solyc08g082100

Descriptions

  • Description WD40 repeat (AHRD V3.3 *** A0A200PUP6_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1904263
IBA
IEA
GOA Databasepositive regulation of TORC1 signaling
GO:1904263
IEA
InterPropositive regulation of TORC1 signaling
GO:0015031
IEA
GOA Databaseprotein transport
GO:0034198
IBA
GOA Databasecellular response to amino acid starvation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005198
IEA
GOA Databasestructural molecule activity
GO:0005198
IEA
InterProstructural molecule activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031080
IBA
GOA Databasenuclear pore outer ring
GO:0035859
IBA
GOA DatabaseSeh1-associated complex
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT1G64350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR037597 Nucleoporin Seh1
IPR037363 Sec13/Seh1 family
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
23.5.1.1.1.7 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (SEH1)