Gene: Solyc08g079620.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g079620.3
  • Transcript Identifier Solyc08g079620.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 61210015-61214627 : positive

Gene Family Information

  • ID HOM05D000274
  • #Genes/#Species 1592/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g079620.3.1
  • uniprot A0A3Q7HVD5
  • gene_id Solyc08g079620

Descriptions

  • Description ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A1U8GA15_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G12410
GO:0006515
IBA
GOA Databaseprotein quality control for misfolded or incompletely synthesized proteins
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004176
IBA
IEA
GOA DatabaseATP-dependent peptidase activity
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0004252
IBA
IEA
GOA Databaseserine-type endopeptidase activity
GO:0004252
IEA
InterProserine-type endopeptidase activity
GO:0051117
IBA
GOA DatabaseATPase binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009368
IBA
GOA Databaseendopeptidase Clp complex
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule AT1G12410
GO:0009840
ISO
PLAZA Integrative Orthologychloroplastic endopeptidase Clp complex AT1G12410
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G12410
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT1G12410
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G12410
GO:0009507
IEA
GOA Databasechloroplast
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 ClpP/crotonase-like domain superfamily
IPR001907 ATP-dependent Clp protease proteolytic subunit
Mapman id Description
19.4.2.8.1 Protein homeostasis.proteolysis.serine-type peptidase activities.mitochondrion Clp-type protease complex.proteolytic component ClpP2