Gene: Solyc08g078000.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g078000.3
  • Transcript Identifier Solyc08g078000.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 59987855-59993106 : negative

Gene Family Information

  • ID HOM05D000584
  • #Genes/#Species 950/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g078000.3.1
  • uniprot A0A3Q7HUF7
  • gene_id Solyc08g078000

Descriptions

  • Description Vesicle-associated protein 2-1 (AHRD V3.3 *** A0A2G2XLS2_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090158
IBA
GOA Databaseendoplasmic reticulum membrane organization
GO:0061817
IBA
GOA Databaseendoplasmic reticulum-plasma membrane tethering

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005789
IBA
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0005789
IEA
InterProendoplasmic reticulum membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005886
IBA
GOA Databaseplasma membrane
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G47180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016763 Vesicle-associated membrane-protein-associated protein
IPR000535 Major sperm protein (MSP) domain
IPR008962 PapD-like superfamily
IPR013783 Immunoglobulin-like fold
Mapman id Description
20.7.1 Cytoskeleton organisation.endoplasmic reticulum-cytoskeleton-plasma membrane interface.contact site protein (VAP27)