Gene: Solyc08g067910.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g067910.3
  • Transcript Identifier Solyc08g067910.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 55048824-55056778 : negative

Gene Family Information

  • ID HOM05D002250
  • #Genes/#Species 299/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g067910.3.1
  • uniprot A0A3Q7HPJ5
  • gene_id Solyc08g067910

Descriptions

  • Description Syntaxin (AHRD V3.3 *** A0A2G3BSP3_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061025
ISO
PLAZA Integrative Orthologymembrane fusion AT3G24350
GO:0006906
IBA
GOA Databasevesicle fusion
GO:0006888
IBA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006886
IBA
IEA
GOA Databaseintracellular protein transport
GO:0048278
IBA
GOA Databasevesicle docking
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005484
IBA
IEA
GOA DatabaseSNAP receptor activity
GO:0000149
IBA
GOA DatabaseSNARE binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031201
IBA
GOA DatabaseSNARE complex
GO:0000139
IBA
GOA DatabaseGolgi membrane
GO:0012505
IBA
GOA Databaseendomembrane system
GO:0016021
IBA
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000727 Target SNARE coiled-coil homology domain
IPR010989 SNARE
IPR021538 Syntaxin-5, N-terminal, Sly1p-binding domain
Mapman id Description
22.3.5.1.1.3 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP3-group component