Gene: Solyc08g067230.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g067230.4
- Transcript Identifier Solyc08g067230.4.1
- Gene Type Coding gene
- Location SL4.0ch08 : 54362286-54365931 : positive
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000980
- #Genes/#Species 529/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc08g067230.4.1
- uniprot A0A3Q7HRG2
- gene_id Solyc08g067230
Descriptions
- Description MADS-box transcription factor (AHRD V3.3 *** F1T120_9ERIC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006357 | IBA | GOA Database | regulation of transcription by RNA polymerase II | |
GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0045944 | IEA | GOA Database | positive regulation of transcription by RNA polymerase II | |
GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0000978 | IBA | GOA Database | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
GO:0000981 | IBA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific | |
GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0046983 | IEA | GOA Database | protein dimerization activity | |
GO:0046983 | IEA | InterPro | protein dimerization activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |