Gene: Solyc08g066020.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g066020.3
  • Transcript Identifier Solyc08g066020.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 52564084-52575074 : negative

Gene Family Information

  • ID HOM05D003051
  • #Genes/#Species 225/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g066020.3.1
  • uniprot A0A3Q7HQP9
  • gene_id Solyc08g066020

Descriptions

  • Description Long chain base biosynthesis protein 1 (AHRD V3.3 *** A0A1U8GFH6_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046512
IBA
GOA Databasesphingosine biosynthetic process
GO:0030148
ISO
PLAZA Integrative Orthologysphingolipid biosynthetic process AT4G36480
GO:0043067
ISO
PLAZA Integrative Orthologyregulation of programmed cell death AT4G36480
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G36480
GO:0009825
ISO
PLAZA Integrative Orthologymultidimensional cell growth AT4G36480
GO:0046513
IBA
GOA Databaseceramide biosynthetic process
GO:0009058
IEA
GOA Databasebiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G36480
GO:0004758
IBA
GOA Databaseserine C-palmitoyltransferase activity
GO:0030170
IEA
GOA Databasepyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IBA
GOA Databaseendoplasmic reticulum
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004839 Aminotransferase, class I/classII
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR015424 Pyridoxal phosphate-dependent transferase
Mapman id Description
5.4.1.1 Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase complex.catalytic subunit LCB1