Gene: Solyc08g007200.4

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc08g007200.4
Transcript Identifier Solyc08g007200.4.1
Gene Type Coding gene
Location SL4.0ch08 : 1776151-1780954 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000584
#Genes/#Species 950/99
Phylogenetic origin

ID ORTHO05D000458
#Genes/#Species 911/99
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid Solyc08g007200.4.1
uniprot A0A3Q7HHP8
gene_id Solyc08g007200

Descriptions

Short descriptions
Ortholog descriptions

Description Vesicle-associated protein 2-1 (AHRD V3.3 *** A0A1U8FGD1_CAPAN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0090158	IBA	GOA Database	endoplasmic reticulum membrane organization
GO:0061817	IBA	GOA Database	endoplasmic reticulum-plasma membrane tethering

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005789	IBA IEA	GOA Database	endoplasmic reticulum membrane
GO:0005789	IEA	InterPro	endoplasmic reticulum membrane
GO:0016021	IEA	GOA Database	integral component of membrane
GO:0016020	IEA	GOA Database	membrane
GO:0005886	IBA	GOA Database	plasma membrane
GO:0005783	ISO	PLAZA Integrative Orthology	endoplasmic reticulum	AT5G47180

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR016763	Vesicle-associated membrane-protein-associated protein
IPR008962	PapD-like superfamily
IPR013783	Immunoglobulin-like fold
IPR000535	Major sperm protein (MSP) domain

Mapman id	Description
20.7.1	Cytoskeleton organisation.endoplasmic reticulum-cytoskeleton-plasma membrane interface.contact site protein (VAP27)