Gene: Solyc08g006880.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g006880.3
  • Transcript Identifier Solyc08g006880.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 1432504-1458785 : negative

Gene Family Information

  • ID HOM05D000121
  • #Genes/#Species 2804/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g006880.3.1
  • uniprot A0A3Q7HKB1
  • gene_id Solyc08g006880

Descriptions

  • Description ABC transporter (AHRD V3.3 *** A0A200R061_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015700
ISO
PLAZA Integrative Orthologyarsenite transport AT1G30400
GO:1902418
ISO
PLAZA Integrative Orthology(+)-abscisic acid D-glucopyranosyl ester transmembrane transport AT2G34660
GO:0042908
ISO
PLAZA Integrative Orthologyxenobiotic transport AT1G30400
GO:0046685
ISO
PLAZA Integrative Orthologyresponse to arsenic-containing substance AT1G30400
GO:0006855
ISO
PLAZA Integrative Orthologydrug transmembrane transport AT1G30400
GO:0055085
IBA
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015446
ISO
PLAZA Integrative OrthologyATPase-coupled arsenite transmembrane transporter activity AT1G30400
GO:0008559
ISO
PLAZA Integrative OrthologyABC-type xenobiotic transporter activity AT1G30400
GO:1902417
ISO
PLAZA Integrative Orthology(+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity AT2G34660
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G30400
GO:0044604
ISO
PLAZA Integrative OrthologyABC-type phytochelatin transporter activity AT1G30400
GO:0140359
IEA
GOA DatabaseABC-type transporter activity
GO:0140359
IEA
InterProABC-type transporter activity
GO:0042626
IBA
GOA DatabaseATPase-coupled transmembrane transporter activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005774
IBA
GOA Databasevacuolar membrane
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G34660
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G30400
GO:0000325
IBA
GOA Databaseplant-type vacuole
GO:0016020
IBA
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044746 ABC transporter C family, six-transmembrane helical domain 1
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036640 ABC transporter type 1, transmembrane domain superfamily
IPR003439 ABC transporter-like, ATP-binding domain
IPR003593 AAA+ ATPase domain
IPR011527 ABC transporter type 1, transmembrane domain
Mapman id Description
24.1.3.1.2 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter
26.7.2.4.1 External stimuli response.toxic compounds.arsenic.vacuolar sequestration.glutathione S-conjugate transporter