Gene: Solyc07g065490.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc07g065490.3
- Transcript Identifier Solyc07g065490.3.1
- Gene Type Coding gene
- Location SL4.0ch07 : 67049943-67056866 : positive
Gene Family Information
- ID HOM05D001707
- #Genes/#Species 379/99
- Phylogenetic origin
- ID ORTHO05D001694
- #Genes/#Species 369/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc07g065490.3.1
- uniprot A0A3Q7HFW0
- gene_id Solyc07g065490
Descriptions
- Description DEK (AHRD V3.3 *-* A0A200RBP9_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006325 | IEA | GOA Database | chromatin organization | |
| GO:0006325 | IEA | InterPro | chromatin organization | |
| GO:2000779 | IBA | GOA Database | regulation of double-strand break repair | |
| GO:0006338 | ISO | PLAZA Integrative Orthology | chromatin remodeling | AT4G26630 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT4G26630 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT4G26630 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT4G26630 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0042393 | IBA | GOA Database | histone binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G26630 |
| GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT4G26630 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G55660 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G26630 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT4G26630 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.1.4.1 | Chromatin organisation.chromatin structure.structure modulation.regulatory factor (DEK) |