Gene: AT4G26630
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G26630
- Transcript Identifier AT4G26630.1
- Gene Type Coding gene
- Location Chr4 : 13430873-13434877 : negative
Gene Family Information
- ID HOM05D001707
- #Genes/#Species 379/99
- Phylogenetic origin
- ID ORTHO05D001694
- #Genes/#Species 369/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G26630.1
- Alias DEK3,DEK-domain containing protein 3
- uniprot Q9SUA1
Descriptions
- Description DEK domain-containing chromatin associated protein
- Computational description DEK domain-containing chromatin associated protein; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT5G55660.1); Has 293195 Blast hits to 121176 proteins in 3836 species: Archae - 1379; Bacteria - 45347; Metazoa - 110567; Fungi - 36004; Plants - 15140; Viruses - 1802; Other Eukaryotes - 82956 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006325 | IEA | GOA Database | chromatin organization | |
| GO:0006325 | IEA | InterPro | chromatin organization | |
| GO:2000779 | IBA | Gene Ontology | regulation of double-strand break repair | 1 |
| GO:0045892 | IEP | Gene Ontology | negative regulation of transcription, DNA-templated | 2 |
| GO:0009651 | IMP, IEP | Gene Ontology | response to salt stress | 2 |
| GO:0006355 | IMP | Gene Ontology | regulation of transcription, DNA-templated | 2 |
| GO:0006338 | IDA | Gene Ontology | chromatin remodeling | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042393 | IDA IBA | Gene Ontology | histone binding | 1 2 |
| GO:0003677 | IEA | Gene Ontology | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0003682 | IDA | Gene Ontology | chromatin binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | HDA | Gene Ontology | cytosol | 3 |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 1 2 |
| GO:0005730 | IDA | Gene Ontology | nucleolus | 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.1.4.1 | Chromatin organisation.chromatin structure.structure modulation.regulatory factor (DEK) |