Gene: Solyc07g056540.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g056540.3
  • Transcript Identifier Solyc07g056540.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 64248555-64251831 : positive

Gene Family Information

  • ID HOM05D000945
  • #Genes/#Species 634/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g056540.3.1
  • uniprot A0A3Q7IAC1
  • gene_id Solyc07g056540

Descriptions

  • Description glycolate oxidase X92888
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050665
ISO
PLAZA Integrative Orthologyhydrogen peroxide biosynthetic process AT4G18360
GO:0019048
ISO
PLAZA Integrative Orthologymodulation by virus of host process Os03g0786100
GO:0002758
ISO
PLAZA Integrative Orthologyinnate immune response-activating signal transduction AT4G18360
GO:0010109
ISO
PLAZA Integrative Orthologyregulation of photosynthesis Os03g0786100
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G18360
GO:0009853
IEA
GOA Databasephotorespiration
GO:0009854
IEA
GOA Databaseoxidative photosynthetic carbon pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008891
IBA
GOA Databaseglycolate oxidase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G14415
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os03g0786100
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0010181
IEA
GOA DatabaseFMN binding
GO:0010181
IEA
InterProFMN binding
GO:0052852
IEA
GOA Databasevery-long-chain-(S)-2-hydroxy-acid oxidase activity
GO:0052853
IEA
GOA Databaselong-chain-(S)-2-hydroxy-long-chain-acid oxidase activity
GO:0052854
IEA
GOA Databasemedium-chain-(S)-2-hydroxy-acid oxidase activity
GO:0003973
IEA
GOA Database(S)-2-hydroxy-acid oxidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G14420
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G14420
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G14420
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G14420
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G14420
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G14420
GO:0005777
IBA
GOA Databaseperoxisome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent
IPR000262 FMN-dependent dehydrogenase
Mapman id Description
1.3.2 Photosynthesis.photorespiration.glycolate oxidase