Gene: Solyc07g056340.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc07g056340.4
- Transcript Identifier Solyc07g056340.4.1
- Gene Type Coding gene
- Location SL4.0ch07 : 64124539-64128676 : negative
Gene Family Information
- ID HOM05D000512
- #Genes/#Species 1048/99
- Phylogenetic origin
- ID ORTHO05D000861
- #Genes/#Species 579/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc07g056340.4.1
- uniprot A0A3Q7HDQ2
- gene_id Solyc07g056340
Descriptions
- Description Protein MEI2-like 5 (AHRD V3.3 *** A0A1U8HKE2_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051321 | IEA | GOA Database | meiotic cell cycle | |
| GO:0000398 | IBA | GOA Database | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IBA IEA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016607 | IBA | GOA Database | nuclear speck |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR035979 | RNA-binding domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR034453 | MEI2-like, RNA recognition motif 1 |
| IPR007201 | Mei2-like, C-terminal RNA recognition motif |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR034454 | MEI2-like, RNA recognition motif 3 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |