Gene: Solyc07g054400.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g054400.3
  • Transcript Identifier Solyc07g054400.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 62647767-62648207 : positive

Gene Family Information

  • ID HOM05D007048
  • #Genes/#Species 113/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g054400.3.1
  • uniprot A0A3Q7HFL9
  • gene_id Solyc07g054400

Descriptions

  • Description Centromere protein S (AHRD V3.3 *** A0A1J3FK69_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0031297
IBA
GOA Databasereplication fork processing
GO:0000712
IBA
GOA Databaseresolution of meiotic recombination intermediates
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT5G50930
GO:0036297
ISO
PLAZA Integrative Orthologyinterstrand cross-link repair AT5G50930
GO:0007129
ISO
PLAZA Integrative Orthologyhomologous chromosome pairing at meiosis AT5G50930
GO:0006312
ISO
PLAZA Integrative Orthologymitotic recombination AT5G50930

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003682
IBA
GOA Databasechromatin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071821
IBA
IEA
GOA DatabaseFANCM-MHF complex
GO:0071821
IEA
InterProFANCM-MHF complex
GO:0043240
IBA
GOA DatabaseFanconi anaemia nuclear complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029003 CENP-S/Mhf1
IPR009072 Histone-fold
Mapman id Description
13.3.5.5.4.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.FANCM-MHF DNA remodeling complex.component MHF1