Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 1.4e-75 286.2 147 100.0
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 2.1e-74 282.3 147 98.6
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 4.2e-67 258.1 140 95.0
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 6.7e-65 250.8 147 87.8
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 1.7e-55 219.5 152 78.3
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 4.1e-54 214.9 146 78.8
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 2.0e-53 212.6 145 78.6
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 3.3e-48 195.3 134 76.1
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 9.7e-48 193.7 134 73.9
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 1.1e-46 190.3 138 71.0
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 1.4e-46 189.9 140 72.1
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 1.2e-45 186.8 127 75.6
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 1.5e-45 186.4 136 72.8
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 4.5e-45 184.9 135 69.6
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 1.1e-43 180.3 133 69.2
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 1.1e-43 180.3 133 69.2
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 1.9e-43 179.5 136 68.4
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 2.5e-43 179.1 123 74.0
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 1.2e-42 176.8 137 62.8
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 6.1e-42 174.5 129 69.0
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 1.0e-41 173.7 126 71.4
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 1.4e-41 173.3 130 68.5
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 2.3e-41 172.6 123 69.1
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 3.9e-41 171.8 127 66.9
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 8.8e-41 170.6 134 66.4
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 1.5e-40 169.9 130 69.2
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 2.0e-40 169.5 125 66.4
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 5.7e-40 167.9 129 66.7
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 7.4e-40 167.5 132 66.7
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 1.3e-39 166.8 129 65.1
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 6.3e-39 164.5 118 68.6
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 6.3e-39 164.5 138 63.0
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 6.3e-39 164.5 129 63.6
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 8.2e-39 164.1 139 62.6
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 8.2e-39 164.1 139 62.6
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 8.2e-39 164.1 166 58.4
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 1.1e-38 163.7 122 69.7
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 1.4e-38 163.3 114 70.2
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 2.4e-38 162.5 139 61.9
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 3.1e-38 162.2 129 62.0
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 5.3e-38 161.4 128 65.6
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 1.2e-37 160.2 133 63.2
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 2.0e-37 159.5 118 68.6
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 2.6e-37 159.1 118 68.6
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 7.7e-37 157.5 123 67.5
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 7.7e-37 157.5 132 65.9
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 7.7e-37 157.5 122 65.6
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 1.0e-36 157.1 114 70.2
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.3e-36 156.8 122 64.8
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 3.8e-36 155.2 126 62.7
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 3.8e-36 155.2 115 67.0
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 3.8e-36 155.2 136 58.8
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 1.5e-35 153.3 120 66.7
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 1.5e-35 153.3 164 53.7
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 1.9e-35 152.9 115 66.1
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 1.9e-35 152.9 115 66.1
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 1.9e-35 152.9 115 66.1
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.9e-35 152.9 139 61.2
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 2.5e-35 152.5 140 60.0
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.2e-35 152.1 123 64.2
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 3.2e-35 152.1 120 66.7
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 7.2e-35 151.0 127 60.6
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 7.2e-35 151.0 147 55.8
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 9.4e-35 150.6 120 67.5
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 9.4e-35 150.6 135 59.3
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 1.2e-34 150.2 130 60.0
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 1.6e-34 149.8 128 62.5
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 2.1e-34 149.4 128 59.4
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 6.1e-34 147.9 138 59.4
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 1.4e-33 146.7 125 63.2
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 4.0e-33 145.2 125 59.2
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 5.2e-33 144.8 119 63.0
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 6.7e-33 144.4 136 55.9
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 1.2e-32 143.7 130 57.7
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 2.0e-32 142.9 128 59.4
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 2.0e-32 142.9 128 57.8
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 2.6e-32 142.5 126 55.6
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 3.3e-32 142.1 135 57.0
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 4.4e-32 141.7 92 80.4
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 4.4e-32 141.7 125 58.4
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 4.4e-32 141.7 136 56.6
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 1.3e-31 140.2 131 55.7
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 1.7e-31 139.8 110 63.6
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 1.7e-31 139.8 136 55.1
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 2.2e-31 139.4 121 58.7
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 2.8e-31 139.0 84 83.3
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 3.7e-31 138.7 126 57.9
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 6.3e-31 137.9 122 59.8
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 8.2e-31 137.5 125 58.4
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 2.4e-30 136.0 113 61.1
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 7.0e-30 134.4 126 55.6
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 3.5e-29 132.1 96 67.7
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 1.3e-28 130.2 128 56.2
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 2.9e-28 129.0 145 47.6
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 5.5e-27 124.8 108 59.3
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 1.2e-26 123.6 96 65.6
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 3.0e-25 119.0 112 55.4
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 5.2e-25 118.2 81 72.8
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 2.0e-24 116.3 140 50.0
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.6e-24 115.9 94 61.7
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.3e-23 113.6 94 60.6
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 1.3e-23 113.6 112 55.4
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.7e-23 112.1 94 59.6
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 7.7e-21 104.4 81 63.0
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.0e-20 104.0 73 74.0
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 1.5e-19 100.1 84 61.9
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 7.2e-19 97.8 99 51.5
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 1.6e-18 96.7 101 54.5
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 8.0e-18 94.4 77 63.6
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 1.0e-17 94.0 121 43.8
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 6.3e-15 84.7 126 39.7
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 3.1e-14 82.4 77 61.0
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 1.8e-09 66.6 95 41.1
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 1.8e-09 66.6 55 58.2
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 5.2e-09 65.1 39 79.5
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 1.2e-08 63.9 89 46.1


User provided reference genes

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