Gene: Solyc07g053920.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g053920.3
  • Transcript Identifier Solyc07g053920.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 62257569-62260967 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g053920.3.1
  • uniprot A0A3Q7HFD2
  • gene_id Solyc07g053920

Descriptions

  • Description Mannan endo-1,4-beta-mannosidase (AHRD V3.3 *** A0A2K3MXH2_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071704
IEA
GOA Databaseorganic substance metabolic process
GO:0071704
IEA
InterProorganic substance metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0010412
ISO
PLAZA Integrative Orthologymannan metabolic process AT2G20680
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G28320

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016985
IEA
GOA Databasemannan endo-1,4-beta-mannosidase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000001

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017853 Glycoside hydrolase superfamily
IPR001547 Glycoside hydrolase, family 5
IPR045053 Mannan endo-1,4-beta-mannosidase-like
Mapman id Description
21.2.3.2.2 Cell wall organisation.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase