Gene: Solyc07g052350.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc07g052350.3
- Transcript Identifier Solyc07g052350.3.1
- Gene Type Coding gene
- Location SL4.0ch07 : 60767231-60775112 : positive
Gene Family Information
- ID HOM05D000228
- #Genes/#Species 1809/100
- Phylogenetic origin
- ID ORTHO05D001122
- #Genes/#Species 480/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc07g052350.3.1
- uniprot A0A3Q7HBK4
- gene_id Solyc07g052350
Descriptions
- Description Aconitate hydratase (AHRD V3.3 *** A0A200Q7Z0_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006101 | IBA | GOA Database | citrate metabolic process | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT4G26970 |
| GO:0006102 | ISO | PLAZA Integrative Orthology | isocitrate metabolic process | AT4G26970 |
| GO:1990641 | ISO | PLAZA Integrative Orthology | response to iron ion starvation | AT4G26970 |
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT4G26970 |
| GO:0006099 | IBA | GOA Database | tricarboxylic acid cycle |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005507 | ISO | PLAZA Integrative Orthology | copper ion binding | AT4G26970 |
| GO:0003994 | IBA IEA | GOA Database | aconitate hydratase activity | |
| GO:0051539 | IBA IEA | GOA Database | 4 iron, 4 sulfur cluster binding | |
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0051536 | IEA | GOA Database | iron-sulfur cluster binding | |
| GO:0047780 | IEA | GOA Database | citrate dehydratase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT4G26970 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT4G26970 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G26970 |
| GO:0005829 | IBA | GOA Database | cytosol | |
| GO:0005739 | IBA | GOA Database | mitochondrion |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 |
| IPR044137 | Aconitase A, swivel domain |
| IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain |
| IPR036008 | Aconitase, iron-sulfur domain |
| IPR000573 | Aconitase A/isopropylmalate dehydratase small subunit, swivel domain |
| IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel |
| IPR006249 | Aconitase/Iron-responsive element-binding protein 2 |