Gene: Solyc07g041310.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g041310.3
  • Transcript Identifier Solyc07g041310.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 52110985-52114893 : negative

Gene Family Information

  • ID HOM05D001583
  • #Genes/#Species 405/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g041310.3.1
  • uniprot A0A3Q7HBR5
  • gene_id Solyc07g041310

Descriptions

  • Description 40S ribosomal protein S3, putative, expressed (AHRD V3.3 *** Q75G91_ORYSJ)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G53870
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0019843
IEA
GOA DatabaserRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT3G53870
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G31610
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G35530
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G31610
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G31610
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G53870
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G53870
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G31610
GO:0005634
IBA
GOA Databasenucleus
GO:0022627
IBA
GOA Databasecytosolic small ribosomal subunit
GO:0015935
IEA
GOA Databasesmall ribosomal subunit
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036419 Ribosomal protein S3, C-terminal domain superfamily
IPR004044 K Homology domain, type 2
IPR001351 Ribosomal protein S3, C-terminal
IPR009019 K homology domain superfamily, prokaryotic type
IPR005703 Ribosomal protein S3, eukaryotic/archaeal
IPR015946 K homology domain-like, alpha/beta
Mapman id Description
17.1.3.1.3 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS3