Gene: Solyc06g082010.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g082010.4
  • Transcript Identifier Solyc06g082010.4.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 45539824-45542578 : positive

Gene Family Information

  • ID HOM05D000377
  • #Genes/#Species 1292/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g082010.4.1
  • uniprot A0A3Q7H1T7
  • gene_id Solyc06g082010

Descriptions

  • Description Zinc finger transcription factor 48
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006950
ISS
Gene Ontologyresponse to stress1
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT2G40140
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G58620
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT3G55980
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT2G40140
GO:0006412
ISO
PLAZA Integrative Orthologytranslation AT5G58620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0005515
IEA
InterProprotein binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G58620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010494
ISO
PLAZA Integrative Orthologycytoplasmic stress granule AT5G58620
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT5G58620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000571 Zinc finger, CCCH-type
IPR002110 Ankyrin repeat
IPR036770 Ankyrin repeat-containing domain superfamily
IPR020683 Ankyrin repeat-containing domain
Mapman id Description
16.8.2 RNA processing.mRNA sequestration.mRNA-binding regulatory factor (TZF)