Gene: Solyc06g076660.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g076660.3
  • Transcript Identifier Solyc06g076660.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 45289962-45291336 : negative

Gene Family Information

  • ID HOM05D002404
  • #Genes/#Species 282/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g076660.3.1
  • uniprot Q8H0Q1
  • gene_id Solyc06g076660

Descriptions

  • Description proliferating cell nuclear antigen
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019985
IBA
GOA Databasetranslesion synthesis
GO:0070207
ISO
PLAZA Integrative Orthologyprotein homotrimerization Os02g0805200
GO:0042276
ISO
PLAZA Integrative Orthologyerror-prone translesion synthesis AT2G29570
GO:0006272
IBA
GOA Databaseleading strand elongation
GO:0006298
IBA
GOA Databasemismatch repair
GO:0006275
IEA
GOA Databaseregulation of DNA replication
GO:0006275
IEA
InterProregulation of DNA replication
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0050790
IEA
GOA Databaseregulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G29570
GO:0030337
IBA
IEA
GOA DatabaseDNA polymerase processivity factor activity
GO:0030337
IEA
InterProDNA polymerase processivity factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G07370
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G07370
GO:0043626
IBA
GOA DatabasePCNA complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022648 Proliferating cell nuclear antigen, PCNA, N-terminal
IPR022649 Proliferating cell nuclear antigen, PCNA, C-terminal
IPR000730 Proliferating cell nuclear antigen, PCNA
Mapman id Description
13.2.3.4.1 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.sliding clamp protein (PCNA)