Gene: Solyc06g072980.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g072980.4
  • Transcript Identifier Solyc06g072980.4.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 42641982-42645453 : negative

Gene Family Information

  • ID HOM05D002417
  • #Genes/#Species 280/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g072980.4.1
  • uniprot A0A3Q7HVB6
  • gene_id Solyc06g072980

Descriptions

  • Description Autophagy-related protein 13 (AHRD V3.3 *** A0A200PMJ6_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006914
IEA
GOA Databaseautophagy
GO:0006914
IEA
InterProautophagy
GO:0000045
IEA
GOA Databaseautophagosome assembly
GO:0000045
IEA
InterProautophagosome assembly
GO:0034727
IBA
GOA Databasepiecemeal microautophagy of the nucleus
GO:0034497
IBA
GOA Databaseprotein localization to phagophore assembly site
GO:0000423
IBA
GOA Databasemitophagy

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G49590

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990316
IBA
IEA
GOA DatabaseAtg1/ULK1 kinase complex
GO:1990316
IEA
InterProAtg1/ULK1 kinase complex
GO:0019898
IBA
GOA Databaseextrinsic component of membrane
GO:0005829
IBA
GOA Databasecytosol
GO:0000407
IBA
GOA Databasephagophore assembly site
GO:0005776
ISO
PLAZA Integrative Orthologyautophagosome AT3G49590

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018731 Autophagy-related protein 13, N-terminal
IPR036570 HORMA domain superfamily
IPR040182 Autophagy-related protein 13
Mapman id Description
19.3.1.2 Protein homeostasis.autophagy.initiation complex.accessory component ATG13